Results/Conclusions Butterfly diversity was significantly higher in the traditional coffee polyculture than in the shaded coffee monoculture, and the traditional polyculture had more forest species and fewer weedy species than the shaded monoculture. The forest fragment harbored the greatest diversity of butterflies, and had a very low abundance of weedy species. Butterfly diversity was stable or increased with distance from the forest in the traditional polyculture, but significantly declined with distance from the forest in the shaded monoculture. The traditional coffee polyculture retained proportionally more forest species and fewer weedy species with distance from the forest than the shaded monoculture. This study suggests that the quality of the coffee matrix and the presence of forest fragments influences the types of species that will persist in human-dominated tropical landscapes, and that the matrix matters for conservation of neo-tropical butterflies.