Results/Conclusions Seabird input decreased species richness and evenness (i.e., causes more heterogeneity of the assemblage), but did not affect diversity (the probability that two individuals belong to different species) or dominance. Seabird input also affected the occurrence and abundance of species on islands. Interestingly, species occurring significantly in a lower proportion of islands than expected were those that also showed a significantly lower relative abundance. This is the case of Triphalopsis spp., occurring in lower number of nesting islands, and when occurring, they did so in significantly lower relative abundance. Our results have conservation implications, in that they showed that diversity in closed communities isolated in habitat fragments yet open to external inputs are negatively affected, decreasing their diversity. Thus, species lost will occur not only due to the decrease in area of the habitat, but also because of the potential effects of disturbance due to external inputs (e.g., fertilizers entering the area from neighboring crops, input of prey from other areas, animals feeding on crops and dumps, etc.).